Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Biological Adhesion (GO:0022610) Genes Targeted by hsa-mir-224 in GCT Seminoma Korkola Cluster 98 Table contains all genes in the GCT Seminoma Korkola cluster number 98. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-224 GO:0022610 4692 NDN necdin homolog (mouse) [Source:HGNC Symbol;Acc:7675] zzz999 54677 CROT carnitine O-octanoyltransferase [Source:HGNC Symbol;Acc:2366] T 7102 TSPAN7 tetraspanin 7 [Source:HGNC Symbol;Acc:11854] T 2295 FOXF2 forkhead box F2 [Source:HGNC Symbol;Acc:3810] zzz999 9781 RNF144A ring finger protein 144A [Source:HGNC Symbol;Acc:20457] P T 64393 ZMAT3 zinc finger, matrin-type 3 [Source:HGNC Symbol;Acc:29983] zzz999 63895 FAM38B family with sequence similarity 38, member B [Source:HGNC Symbol;Acc:26270] P T 8082 SSPN sarcospan (Kras oncogene-associated gene) [Source:HGNC Symbol;Acc:11322] zzz999 Yes 2882 GPX7 glutathione peroxidase 7 [Source:HGNC Symbol;Acc:4559] zzz999 285282 RABL3 RAB, member of RAS oncogene family-like 3 [Source:HGNC Symbol;Acc:18072] zzz999 23635 SSBP2 single-stranded DNA binding protein 2 [Source:HGNC Symbol;Acc:15831] zzz999 221061 FAM171A1 family with sequence similarity 171, member A1 [Source:HGNC Symbol;Acc:23522] zzz999 1909 EDNRA endothelin receptor type A [Source:HGNC Symbol;Acc:3179] P T 538 ATP7A ATPase, Cu++ transporting, alpha polypeptide [Source:HGNC Symbol;Acc:869] zzz999 6376 CX3CL1 chemokine (C-X3-C motif) ligand 1 [Source:HGNC Symbol;Acc:10647] T Yes 5295 PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) [Source:HGNC Symbol;Acc:8979] zzz999 11197 WIF1 WNT inhibitory factor 1 [Source:HGNC Symbol;Acc:18081] zzz999 7739 ZNF185 zinc finger protein 185 (LIM domain) [Source:HGNC Symbol;Acc:12976] T 7227 TRPS1 trichorhinophalangeal syndrome I [Source:HGNC Symbol;Acc:12340] zzz999 9686 VGLL4 vestigial like 4 (Drosophila) [Source:HGNC Symbol;Acc:28966] zzz999 9215 LARGE like-glycosyltransferase [Source:HGNC Symbol;Acc:6511] T 51309 ARMCX1 armadillo repeat containing, X-linked 1 [Source:HGNC Symbol;Acc:18073] zzz999 4147 MATN2 matrilin 2 [Source:HGNC Symbol;Acc:6908] zzz999 22829 NLGN4Y neuroligin 4, Y-linked [Source:HGNC Symbol;Acc:15529] zzz999 Yes 55273 TMEM100 transmembrane protein 100 [Source:HGNC Symbol;Acc:25607] zzz999 9037 SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A [Source:HGNC Symbol;Acc:10736] T Yes 54360 CYTL1 cytokine-like 1 [Source:HGNC Symbol;Acc:24435] zzz999 5348 FXYD1 FXYD domain containing ion transport regulator 1 [Source:HGNC Symbol;Acc:4025] zzz999 23493 HEY2 hairy/enhancer-of-split related with YRPW motif 2 [Source:HGNC Symbol;Acc:4881] zzz999 5737 PTGFR prostaglandin F receptor (FP) [Source:HGNC Symbol;Acc:9600] T 83988 NCALD neurocalcin delta [Source:HGNC Symbol;Acc:7655] zzz999 23462 HEY1 hairy/enhancer-of-split related with YRPW motif 1 [Source:HGNC Symbol;Acc:4880] zzz999 4921 DDR2 discoidin domain receptor tyrosine kinase 2 [Source:HGNC Symbol;Acc:2731] zzz999 Yes 83468 GLT8D2 glycosyltransferase 8 domain containing 2 [Source:HGNC Symbol;Acc:24890] zzz999 27333 GOLIM4 golgi integral membrane protein 4 [Source:HGNC Symbol;Acc:15448] zzz999 10982 MAPRE2 microtubule-associated protein, RP/EB family, member 2 [Source:HGNC Symbol;Acc:6891] T 23194 FBXL7 F-box and leucine-rich repeat protein 7 [Source:HGNC Symbol;Acc:13604] T 4239 MFAP4 microfibrillar-associated protein 4 [Source:HGNC Symbol;Acc:7035] zzz999 Yes 2195 FAT1 FAT tumor suppressor homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:3595] zzz999 Yes 1296 COL8A2 collagen, type VIII, alpha 2 [Source:HGNC Symbol;Acc:2216] zzz999 Yes 26040 SETBP1 SET binding protein 1 [Source:HGNC Symbol;Acc:15573] zzz999 23229 ARHGEF9 Cdc42 guanine nucleotide exchange factor (GEF) 9 [Source:HGNC Symbol;Acc:14561] P T 79776 ZFHX4 zinc finger homeobox 4 [Source:HGNC Symbol;Acc:30939] P T 10234 LRRC17 leucine rich repeat containing 17 [Source:HGNC Symbol;Acc:16895] zzz999 3913 LAMB2 laminin, beta 2 (laminin S) [Source:HGNC Symbol;Acc:6487] zzz999 Yes 55638 SYBU syntabulin (syntaxin-interacting) [Source:HGNC Symbol;Acc:26011] zzz999 9353 SLIT2 slit homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:11086] zzz999 Yes 65983 GRAMD3 GRAM domain containing 3 [Source:HGNC Symbol;Acc:24911] zzz999 56034 PDGFC platelet derived growth factor C [Source:HGNC Symbol;Acc:8801] zzz999 55810 FOXJ2 forkhead box J2 [Source:HGNC Symbol;Acc:24818] T 8470 SORBS2 sorbin and SH3 domain containing 2 [Source:HGNC Symbol;Acc:24098] zzz999 5325 PLAGL1 pleiomorphic adenoma gene-like 1 [Source:HGNC Symbol;Acc:9046] zzz999 4958 OMD osteomodulin [Source:HGNC Symbol;Acc:8134] zzz999 Yes 8910 SGCE sarcoglycan, epsilon [Source:HGNC Symbol;Acc:10808] zzz999 Yes 22926 ATF6 activating transcription factor 6 [Source:HGNC Symbol;Acc:791] zzz999 5638 PRRG1 proline rich Gla (G-carboxyglutamic acid) 1 [Source:HGNC Symbol;Acc:9469] T 9547 CXCL14 chemokine (C-X-C motif) ligand 14 [Source:HGNC Symbol;Acc:10640] zzz999 8660 IRS2 insulin receptor substrate 2 [Source:HGNC Symbol;Acc:6126] T 3764 KCNJ8 potassium inwardly-rectifying channel, subfamily J, member 8 [Source:HGNC Symbol;Acc:6269] zzz999 3730 KAL1 Kallmann syndrome 1 sequence [Source:HGNC Symbol;Acc:6211] T Yes 81578 COL21A1 collagen, type XXI, alpha 1 [Source:HGNC Symbol;Acc:17025] P T Yes 3973 LHCGR luteinizing hormone/choriogonadotropin receptor [Source:HGNC Symbol;Acc:6585] zzz999 26035 GLCE glucuronic acid epimerase [Source:HGNC Symbol;Acc:17855] zzz999 25960 GPR124 G protein-coupled receptor 124 [Source:HGNC Symbol;Acc:17849] zzz999 51435 SCARA3 scavenger receptor class A, member 3 [Source:HGNC Symbol;Acc:19000] zzz999 79633 FAT4 FAT tumor suppressor homolog 4 (Drosophila) [Source:HGNC Symbol;Acc:23109] zzz999 Yes 9182 RASSF9 Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:HGNC Symbol;Acc:15739] zzz999 10512 SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:HGNC Symbol;Acc:10725] T 8321 FZD1 frizzled homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:4038] zzz999 57419 SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 [Source:HGNC Symbol;Acc:10977] P T 6583 SLC22A4 solute carrier family 22 (organic cation/ergothioneine transporter), member 4 [Source:HGNC Symbol;Acc:10968] zzz999 83989 FAM172A family with sequence similarity 172, member A [Source:HGNC Symbol;Acc:25365] zzz999 5806 PTX3 pentraxin 3, long [Source:HGNC Symbol;Acc:9692] P T 10216 PRG4 proteoglycan 4 [Source:HGNC Symbol;Acc:9364] zzz999 2012 EMP1 epithelial membrane protein 1 [Source:HGNC Symbol;Acc:3333] zzz999 83604 TMEM47 transmembrane protein 47 [Source:HGNC Symbol;Acc:18515] T 3908 LAMA2 laminin, alpha 2 [Source:HGNC Symbol;Acc:6482] zzz999 Yes 3725 JUN jun proto-oncogene [Source:HGNC Symbol;Acc:6204] zzz999 11096 ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 [Source:HGNC Symbol;Acc:221] T 57125 PLXDC1 plexin domain containing 1 [Source:HGNC Symbol;Acc:20945] T 390 RND3 Rho family GTPase 3 [Source:HGNC Symbol;Acc:671] P T Yes 7025 NR2F1 nuclear receptor subfamily 2, group F, member 1 [Source:HGNC Symbol;Acc:7975] zzz999 23621 BACE1 beta-site APP-cleaving enzyme 1 [Source:HGNC Symbol;Acc:933] zzz999 1808 DPYSL2 dihydropyrimidinase-like 2 [Source:HGNC Symbol;Acc:3014] P T 90627 STARD13 StAR-related lipid transfer (START) domain containing 13 [Source:HGNC Symbol;Acc:19164] zzz999 1524 CX3CR1 chemokine (C-X3-C motif) receptor 1 [Source:HGNC Symbol;Acc:2558] zzz999 Yes 25959 KANK2 KN motif and ankyrin repeat domains 2 [Source:HGNC Symbol;Acc:29300] T 51226 COPZ2 coatomer protein complex, subunit zeta 2 [Source:HGNC Symbol;Acc:19356] zzz999 11230 PRAF2 PRA1 domain family, member 2 [Source:HGNC Symbol;Acc:28911] zzz999 1307 COL16A1 collagen, type XVI, alpha 1 [Source:HGNC Symbol;Acc:2193] zzz999 Yes 55107 ANO1 anoctamin 1, calcium activated chloride channel [Source:HGNC Symbol;Acc:21625] zzz999 55022 PID1 phosphotyrosine interaction domain containing 1 [Source:HGNC Symbol;Acc:26084] zzz999 2059 EPS8 epidermal growth factor receptor pathway substrate 8 [Source:HGNC Symbol;Acc:3420] zzz999 51334 PRR16 proline rich 16 [Source:HGNC Symbol;Acc:29654] zzz999 26052 DNM3 dynamin 3 [Source:HGNC Symbol;Acc:29125] P T 4281 MID1 midline 1 (Opitz/BBB syndrome) [Source:HGNC Symbol;Acc:7095] P T 5327 PLAT plasminogen activator, tissue [Source:HGNC Symbol;Acc:9051] zzz999 22998 LIMCH1 LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:29191] zzz999 5334 PLCL1 phospholipase C-like 1 [Source:HGNC Symbol;Acc:9063] zzz999 29970 SCHIP1 schwannomin interacting protein 1 [Source:HGNC Symbol;Acc:15678] zzz999 1489 CTF1 cardiotrophin 1 [Source:HGNC Symbol;Acc:2499] zzz999 8323 FZD6 frizzled homolog 6 (Drosophila) [Source:HGNC Symbol;Acc:4044] zzz999 6091 ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:10249] zzz999 Yes 27303 RBMS3 RNA binding motif, single stranded interacting protein 3 [Source:HGNC Symbol;Acc:13427] zzz999 5872 RAB13 RAB13, member RAS oncogene family [Source:HGNC Symbol;Acc:9762] zzz999 Yes 55816 DOK5 docking protein 5 [Source:HGNC Symbol;Acc:16173] zzz999 1833 EPYC epiphycan [Source:HGNC Symbol;Acc:3053] zzz999 25891 PAMR1 peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:24554] zzz999 93664 CADPS2 Ca++-dependent secretion activator 2 [Source:HGNC Symbol;Acc:16018] zzz999 11081 KERA keratocan [Source:HGNC Symbol;Acc:6309] zzz999 5098 PCDHGC3 protocadherin gamma subfamily C, 3 [Source:HGNC Symbol;Acc:8716] zzz999 Yes 25975 EGFL6 EGF-like-domain, multiple 6 [Source:HGNC Symbol;Acc:3235] zzz999 Yes 5187 PER1 period homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:8845] zzz999 4129 MAOB monoamine oxidase B [Source:HGNC Symbol;Acc:6834] zzz999 4482 MSRA methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:7377] T 677 ZFP36L1 zinc finger protein 36, C3H type-like 1 [Source:HGNC Symbol;Acc:1107] T 4856 NOV nephroblastoma overexpressed gene [Source:HGNC Symbol;Acc:7885] T 5507 PPP1R3C protein phosphatase 1, regulatory (inhibitor) subunit 3C [Source:HGNC Symbol;Acc:9293] T 25907 TMEM158 transmembrane protein 158 (gene/pseudogene) [Source:HGNC Symbol;Acc:30293] zzz999 25895 METTL21B methyltransferase like 21B [Source:HGNC Symbol;Acc:24936] zzz999 5789 PTPRD protein tyrosine phosphatase, receptor type, D [Source:HGNC Symbol;Acc:9668] zzz999 27123 DKK2 dickkopf homolog 2 (Xenopus laevis) [Source:HGNC Symbol;Acc:2892] T 4969 OGN osteoglycin [Source:HGNC Symbol;Acc:8126] T

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